Method |
Description |
|
chainB ( ) |
Generate the internal arrays containing the list of junk and non-junk
characters for the second ($b) sequence. |
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findLongestMatch ( integer $alo, integer $ahi, integer $blo, integer $bhi ) : array |
Find the longest matching block in the two sequences, as defined by the
lower and upper constraints for each sequence. (for the first sequence,
$alo - $ahi and for the second sequence, $blo - $bhi). |
|
getMatchingBlocks ( ) : array |
Return a nested set of arrays for all of the matching sub-sequences
in the strings $a and $b. |
|
tupleSort ( array $a, array $b ) : integer |
Sort an array by the nested arrays it contains. Helper function for getMatchingBlocks. |
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